Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm12447-201ENSMUST00000119110 470 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm7212-201ENSMUST00000120817 348 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm14237-201ENSMUST00000122080 430 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm38131-201ENSMUST00000192449 430 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm3544-201ENSMUST00000196129 305 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm45122-201ENSMUST00000206376 784 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.94□□□□□ -1.3
Cxcl12P40224 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
Cxcl12P40224 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm26289-201ENSMUST00000104169 131 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm20770-201ENSMUST00000193474 694 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm10416-201ENSMUST00000197379 645 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm7570-201ENSMUST00000215246 698 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm9269-201ENSMUST00000221661 578 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm9315-201ENSMUST00000222696 908 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cxcl12P40224 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.93□□□□□ -1.3
Cxcl12P40224 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cxcl12P40224 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm43800-201ENSMUST00000201868 2731 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm11848-201ENSMUST00000121207 973 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm23250-201ENSMUST00000157444 267 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm23995-201ENSMUST00000158060 129 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm23343-201ENSMUST00000158964 143 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Gm2959-201ENSMUST00000169844 621 ntBASIC6.92□□□□□ -1.3
Cxcl12P40224 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms