Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm23539-201ENSMUST00000157537 224 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.8□□□□□ -1.16
Col1a1P11087 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm9517-201ENSMUST00000195021 874 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm45514-201ENSMUST00000211531 689 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Gm7570-201ENSMUST00000215246 698 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm4510-201ENSMUST00000218265 427 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.8□□□□□ -1.16
Col1a1P11087 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col1a1P11087 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col1a1P11087 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col1a1P11087 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm25917-201ENSMUST00000104267 130 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm22820-201ENSMUST00000157205 329 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Mir199b-201ENSMUST00000175066 110 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm23632-201ENSMUST00000175289 125 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm21756-201ENSMUST00000178380 930 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm21405-201ENSMUST00000179024 930 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm2539-203ENSMUST00000181352 746 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm21191-201ENSMUST00000186484 930 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm29357-201ENSMUST00000186877 698 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm29503-201ENSMUST00000191044 930 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Col1a1P11087 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Col1a1P11087 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col1a1P11087 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.79□□□□□ -1.16
Col1a1P11087 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.78□□□□□ -1.16
Col1a1P11087 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
Col1a1P11087 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm24173-201ENSMUST00000104130 128 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm22103-201ENSMUST00000116733 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm26475-201ENSMUST00000116769 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm23620-201ENSMUST00000116812 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm25042-201ENSMUST00000116856 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm25540-201ENSMUST00000116880 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm14870-201ENSMUST00000118414 156 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm15781-201ENSMUST00000120216 323 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.78□□□□□ -1.16
Col1a1P11087 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col1a1P11087 Gm23550-201ENSMUST00000179003 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm25123-201ENSMUST00000179154 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm25353-201ENSMUST00000179366 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm22992-201ENSMUST00000179496 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm25892-201ENSMUST00000179867 121 ntBASIC7.78□□□□□ -1.16
Col1a1P11087 Gm24092-201ENSMUST00000180257 121 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms