Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm7821-201ENSMUST00000117111 788 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm11501-201ENSMUST00000118039 581 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm13930-201ENSMUST00000118569 368 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm6987-201ENSMUST00000119319 428 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm25722-201ENSMUST00000157498 279 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm22552-201ENSMUST00000157796 337 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm22990-201ENSMUST00000175427 89 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm28117-201ENSMUST00000188472 371 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm43089-201ENSMUST00000199162 275 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm43377-201ENSMUST00000201640 455 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm44896-201ENSMUST00000206190 772 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm13877-201ENSMUST00000120614 417 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm14489-201ENSMUST00000120868 901 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm8577-201ENSMUST00000122420 986 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm27507-201ENSMUST00000184199 93 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm4860-201ENSMUST00000200368 454 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm46203-201ENSMUST00000218130 478 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.24□□□□□ -1.25
Chmp6P0C0A3 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm7746-201ENSMUST00000120966 503 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm13462-201ENSMUST00000121472 961 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms