Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm17366-201ENSMUST00000167629 187 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm22548-201ENSMUST00000174899 78 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm3351-201ENSMUST00000193454 505 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm37463-201ENSMUST00000193819 796 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm44360-201ENSMUST00000200081 82 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Hoxc9P09633 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.61□□□□□ -1.03
Hoxc9P09633 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxc9P09633 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxc9P09633 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxc9P09633 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Hoxc9P09633 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm24434-201ENSMUST00000104081 132 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC8.6□□□□□ -1.03
Hoxc9P09633 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm27210-201ENSMUST00000184263 402 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm37604-201ENSMUST00000191749 1272 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm17997-201ENSMUST00000211801 840 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.6□□□□□ -1.03
Hoxc9P09633 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxc9P09633 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
Hoxc9P09633 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxc9P09633 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.6□□□□□ -1.03
Hoxc9P09633 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Hoxc9P09633 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxc9P09633 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxc9P09633 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm22370-201ENSMUST00000102422 83 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm12643-201ENSMUST00000116078 374 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm8534-201ENSMUST00000118553 766 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm12565-201ENSMUST00000119004 649 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm7266-201ENSMUST00000187999 405 ntBASIC8.59□□□□□ -1.03
Hoxc9P09633 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxc9P09633 Gm42799-201ENSMUST00000201331 328 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms