Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxd3P09027 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxd3P09027 AC120425.1-201ENSMUST00000225213 2360 ntBASIC6.49□□□□□ -1.37
Hoxd3P09027 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm43942-201ENSMUST00000204522 2859 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm37074-201ENSMUST00000193444 1843 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Nedd4l-204ENSMUST00000224347 3150 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm25876-201ENSMUST00000104329 119 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm13682-201ENSMUST00000117524 702 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm13650-201ENSMUST00000117729 433 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm14648-201ENSMUST00000119328 483 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm13357-201ENSMUST00000120528 537 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm5383-201ENSMUST00000121177 617 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.48□□□□□ -1.37
Hoxd3P09027 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm22733-201ENSMUST00000158094 91 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Mir7060-201ENSMUST00000183486 137 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm8870-201ENSMUST00000188170 775 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm37977-201ENSMUST00000193096 721 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm18867-201ENSMUST00000198022 1179 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm3189-201ENSMUST00000205595 832 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Olfr936-202ENSMUST00000216912 937 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Gm36262-201ENSMUST00000223274 499 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AC107663.2-201ENSMUST00000225534 1234 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 AC109172.2-201ENSMUST00000228792 381 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxd3P09027 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxd3P09027 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC6.48□□□□□ -1.37
Hoxd3P09027 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms