Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm24871-201ENSMUST00000083099 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm22864-201ENSMUST00000083950 130 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm25099-201ENSMUST00000093716 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm2003-201ENSMUST00000118537 636 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm12632-201ENSMUST00000121223 495 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm9001-201ENSMUST00000121642 399 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm1989-201ENSMUST00000126244 636 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm22795-201ENSMUST00000157233 118 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm24962-201ENSMUST00000157917 109 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm25455-201ENSMUST00000157946 325 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm25164-201ENSMUST00000158908 116 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm4781-201ENSMUST00000167995 781 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm8893-201ENSMUST00000172146 1242 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm4891-201ENSMUST00000182279 912 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm5317-201ENSMUST00000204445 847 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm29977-201ENSMUST00000206804 724 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 AC114916.1-201ENSMUST00000228465 494 ntBASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdh1F7BJK1 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms