Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm26163-201ENSMUST00000083792 178 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm44916-201ENSMUST00000208664 2194 ntBASIC5.64□□□□□ -1.51
Col6a4A2AX52 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a4A2AX52 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm7931-201ENSMUST00000121537 271 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm25780-201ENSMUST00000122528 253 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm5970-201ENSMUST00000131638 1216 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm42462-201ENSMUST00000196543 1363 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm22372-201ENSMUST00000104589 136 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm25459-201ENSMUST00000157953 114 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm4956-202ENSMUST00000178869 672 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm28620-201ENSMUST00000190463 439 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm38254-201ENSMUST00000192276 1009 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm20770-201ENSMUST00000193474 694 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm42580-201ENSMUST00000197223 753 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm43215-201ENSMUST00000199108 252 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC5.63□□□□□ -1.51
Col6a4A2AX52 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.63□□□□□ -1.51
Col6a4A2AX52 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.62□□□□□ -1.51
Col6a4A2AX52 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a4A2AX52 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms