Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Gm18226-201ENSMUST00000215261 521 ntBASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
H2afb2S4R1M3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Thap6-201ENSMUST00000191860 3151 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm13735-201ENSMUST00000120217 670 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm12535-201ENSMUST00000121025 484 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm14038-201ENSMUST00000121500 807 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm5456-201ENSMUST00000170706 844 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm26381-201ENSMUST00000174895 92 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm22119-201ENSMUST00000175594 99 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm17045-201ENSMUST00000178600 844 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm26587-201ENSMUST00000180795 989 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Trbv9-201ENSMUST00000194494 290 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm4585-201ENSMUST00000207218 452 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm5341-201ENSMUST00000058881 489 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm28392-201ENSMUST00000077630 393 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Mir106b-201ENSMUST00000083580 82 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
H2afb2S4R1M3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm25396-201ENSMUST00000103981 133 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm2178-201ENSMUST00000104927 357 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm15007-201ENSMUST00000119982 710 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm20432-201ENSMUST00000173716 250 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm9274-201ENSMUST00000182505 984 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm29383-201ENSMUST00000188284 480 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm28846-201ENSMUST00000189161 368 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm29496-201ENSMUST00000189854 693 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm36932-201ENSMUST00000195226 929 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.61□□□□□ -1.35
H2afb2S4R1M3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms