Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rnft1Q9DCN7 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rnft1Q9DCN7 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm22439-201ENSMUST00000104048 132 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm24373-201ENSMUST00000104393 132 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm11972-201ENSMUST00000118514 389 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm11371-201ENSMUST00000120294 385 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm3715-201ENSMUST00000172308 617 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm25574-201ENSMUST00000175245 249 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm28335-201ENSMUST00000186204 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm28558-201ENSMUST00000187373 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm28734-201ENSMUST00000188104 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm28968-201ENSMUST00000190413 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm28341-201ENSMUST00000190883 472 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm38229-201ENSMUST00000191931 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm38121-201ENSMUST00000193213 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm37991-201ENSMUST00000194297 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm38035-201ENSMUST00000194427 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm38350-201ENSMUST00000194789 696 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm21461-201ENSMUST00000200382 863 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm5418-201ENSMUST00000206932 528 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm44690-201ENSMUST00000207984 382 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm18860-201ENSMUST00000212029 764 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.72□□□□□ -1.33
Rnft1Q9DCN7 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Rnft1Q9DCN7 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Gm25614-201ENSMUST00000104013 133 ntBASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Gm12123-201ENSMUST00000120348 472 ntBASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rnft1Q9DCN7 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms