Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Clp1Q99LI9 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm22927-201ENSMUST00000104268 131 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm11858-201ENSMUST00000117935 838 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm12713-201ENSMUST00000118404 764 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm13679-201ENSMUST00000118678 484 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Mir6357-201ENSMUST00000184246 104 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm28117-201ENSMUST00000188472 371 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm37383-201ENSMUST00000191750 745 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm19104-201ENSMUST00000198392 679 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm2622-201ENSMUST00000200018 471 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm7557-201ENSMUST00000221935 865 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC155305.1-201ENSMUST00000222207 319 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC124397.1-201ENSMUST00000224296 653 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.96□□□□□ -1.14
Clp1Q99LI9 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Clp1Q99LI9 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm24590-201ENSMUST00000116699 119 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm14786-201ENSMUST00000117127 944 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm12593-201ENSMUST00000120981 743 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm14990-201ENSMUST00000122354 445 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm24198-201ENSMUST00000157812 108 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm22361-201ENSMUST00000158435 176 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm16138-201ENSMUST00000159341 821 ntBASIC7.95□□□□□ -1.14
Clp1Q99LI9 Gm3208-201ENSMUST00000168281 427 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms