Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm24369-201ENSMUST00000175387 96 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm26238-201ENSMUST00000175538 117 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm37620-201ENSMUST00000192910 501 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm22053-201ENSMUST00000083394 200 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm29486-201ENSMUST00000088648 372 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm15596-201ENSMUST00000121139 784 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm7289-201ENSMUST00000168993 734 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm24826-202ENSMUST00000197298 216 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Snora21-201ENSMUST00000082967 137 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Gm18359-201ENSMUST00000173024 1459 ntBASIC7.94□□□□□ -1.14
Vps53Q8CCB4 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm22284-201ENSMUST00000104132 132 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm13196-201ENSMUST00000118297 379 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm12369-201ENSMUST00000121343 942 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm12518-201ENSMUST00000122075 779 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm24239-201ENSMUST00000157791 255 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm25556-201ENSMUST00000158077 144 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm37669-201ENSMUST00000192184 820 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm29747-201ENSMUST00000194764 585 ntBASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC7.93□□□□□ -1.14
Vps53Q8CCB4 Gm7439-201ENSMUST00000214053 835 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms