Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm16248-201ENSMUST00000124238 243 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm6921-201ENSMUST00000161478 435 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Gm45122-201ENSMUST00000206376 784 ntBASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Col6a6Q8C6K9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm10513-201ENSMUST00000194203 6468 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm11976-201ENSMUST00000119236 295 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm14938-201ENSMUST00000119482 943 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Mir6348-201ENSMUST00000183804 120 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm9292-201ENSMUST00000222008 710 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm5386-201ENSMUST00000121749 2450 ntBASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a6Q8C6K9 Gm26079-201ENSMUST00000104066 133 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm12447-201ENSMUST00000119110 470 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm13489-201ENSMUST00000121234 971 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm25374-201ENSMUST00000158158 101 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Mir3572-201ENSMUST00000175549 86 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Mir6361-201ENSMUST00000185079 101 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm42584-201ENSMUST00000201404 220 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Gm19212-201ENSMUST00000216642 862 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col6a6Q8C6K9 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm43254-201ENSMUST00000199187 2491 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm12643-201ENSMUST00000116078 374 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm13835-201ENSMUST00000118459 685 ntBASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a6Q8C6K9 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms