Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm12988-201ENSMUST00000119054 478 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm12955-201ENSMUST00000119689 957 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm13163-201ENSMUST00000119875 336 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm12632-201ENSMUST00000121223 495 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm11882-201ENSMUST00000121463 506 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm14979-201ENSMUST00000121561 1035 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm29435-201ENSMUST00000191310 689 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm2287-201ENSMUST00000197417 1084 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm43108-201ENSMUST00000200525 293 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm44380-201ENSMUST00000203125 293 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm19596-201ENSMUST00000203685 739 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm20074-201ENSMUST00000208144 484 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm8575-201ENSMUST00000210262 521 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm2961-201ENSMUST00000211074 772 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm18972-201ENSMUST00000218873 630 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Trim47Q8C0E3 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.52□□□□□ -1.04
Trim47Q8C0E3 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm5228-201ENSMUST00000117186 357 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm11984-201ENSMUST00000118142 766 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm13229-201ENSMUST00000118238 340 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm8577-201ENSMUST00000122420 986 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm22390-201ENSMUST00000157588 325 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm24773-201ENSMUST00000158513 99 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm28802-201ENSMUST00000188624 944 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm28639-201ENSMUST00000191519 481 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm29950-201ENSMUST00000195273 237 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm37585-201ENSMUST00000195440 280 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm29815-201ENSMUST00000202418 178 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Gm18410-201ENSMUST00000207199 577 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC8.52□□□□□ -1.05
Trim47Q8C0E3 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim47Q8C0E3 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms