Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 AC134577.3-201ENSMUST00000226490 3000 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm26422-201ENSMUST00000104276 132 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm15618-201ENSMUST00000121610 452 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm12152-201ENSMUST00000122465 684 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm20491-201ENSMUST00000173765 1241 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm27998-201ENSMUST00000184902 361 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm21139-201ENSMUST00000186594 877 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Igkv4-83-201ENSMUST00000196933 334 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm36448-201ENSMUST00000199916 438 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm24695-201ENSMUST00000083877 83 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm18879-201ENSMUST00000221187 1537 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp40Q8BWR4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Mir706-201ENSMUST00000102262 84 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm22764-201ENSMUST00000158370 92 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm18006-201ENSMUST00000177411 662 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 n-R5s209-201ENSMUST00000179494 119 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm2602-201ENSMUST00000202112 571 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 AC137902.1-201ENSMUST00000228184 102 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm21731-201ENSMUST00000079524 489 ntBASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp40Q8BWR4 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm24888-201ENSMUST00000104387 130 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm14870-201ENSMUST00000118414 156 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm13455-201ENSMUST00000118767 517 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm15502-201ENSMUST00000121449 208 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm6977-201ENSMUST00000121568 512 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm15696-201ENSMUST00000121730 445 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm9064-201ENSMUST00000163579 566 ntBASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.23□□□□□ -0.93
Usp40Q8BWR4 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms