Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm15149-201ENSMUST00000119370 360 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm14614-201ENSMUST00000119873 384 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm25722-201ENSMUST00000157498 279 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm25717-201ENSMUST00000158631 353 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm19791-201ENSMUST00000180398 859 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm37631-201ENSMUST00000192275 364 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm18985-201ENSMUST00000196472 1079 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm43212-201ENSMUST00000198208 394 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr519-201ENSMUST00000084752 960 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.82□□□□□ -1.16
Ddx55Q6ZPL9 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm11256-201ENSMUST00000118109 829 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm13702-201ENSMUST00000118542 825 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm14485-201ENSMUST00000119489 493 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms