Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Foxc1Q61572 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.33□□□□□ -1.4
Foxc1Q61572 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Foxc1Q61572 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.33□□□□□ -1.4
Foxc1Q61572 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Foxc1Q61572 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Foxc1Q61572 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm46995-201ENSMUST00000223445 1378 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm37549-201ENSMUST00000194096 4065 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 CT009550.4-202ENSMUST00000227369 3076 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm15169-202ENSMUST00000130794 2335 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Fam45a-201ENSMUST00000025957 2307 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Aldh1a1-201ENSMUST00000087638 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ube2k-205ENSMUST00000201383 1553 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm7700-201ENSMUST00000120273 970 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 4933407L21Rik-202ENSMUST00000129392 503 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Fam229b-207ENSMUST00000137132 663 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm23542-201ENSMUST00000158208 96 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm22207-201ENSMUST00000158609 317 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm25975-201ENSMUST00000158702 125 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Mir6974-201ENSMUST00000184381 83 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Cysrt1-203ENSMUST00000186719 909 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm28361-201ENSMUST00000188825 474 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm30932-201ENSMUST00000191893 274 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm23377-202ENSMUST00000196828 138 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm43846-201ENSMUST00000200502 932 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm7565-201ENSMUST00000203611 623 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm44927-201ENSMUST00000207573 716 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 B230311B06Rik-202ENSMUST00000207610 687 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm45857-201ENSMUST00000212207 356 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Dppa5b-201ENSMUST00000214261 348 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Dppa5c-201ENSMUST00000216268 348 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm5649-201ENSMUST00000217918 951 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 AC153798.1-201ENSMUST00000219942 244 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 AC154849.1-201ENSMUST00000224873 960 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 AC123692.2-201ENSMUST00000226272 342 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Mylpf-201ENSMUST00000032910 766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Dmrtc1a-201ENSMUST00000033686 1247 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Mir187-201ENSMUST00000083598 61 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Foxc1Q61572 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Foxc1Q61572 1700028E10Rik-203ENSMUST00000201142 2310 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ptafr-201ENSMUST00000070690 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms