Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm37609-201ENSMUST00000191778 678 ntBASIC8.23□□□□□ -1.09
Shank3Q4ACU6 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm17918-201ENSMUST00000205315 574 ntBASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 AC112956.1-201ENSMUST00000213563 492 ntBASIC8.23□□□□□ -1.09
Shank3Q4ACU6 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Shank3Q4ACU6 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm4789-201ENSMUST00000121708 1216 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm16269-201ENSMUST00000160532 409 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Mir3572-201ENSMUST00000175549 86 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm27219-201ENSMUST00000184633 742 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm2950-201ENSMUST00000185530 520 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm18728-201ENSMUST00000186155 753 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm19182-201ENSMUST00000207139 577 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm45473-201ENSMUST00000211452 616 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 AC116591.1-201ENSMUST00000227919 351 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Gm5512-201ENSMUST00000218013 1353 ntBASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Shank3Q4ACU6 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm38077-201ENSMUST00000193657 3245 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm14173-201ENSMUST00000117690 278 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm22724-201ENSMUST00000158091 127 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Gm19060-201ENSMUST00000201959 421 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Shank3Q4ACU6 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Shank3Q4ACU6 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm14512-201ENSMUST00000117924 230 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm14870-201ENSMUST00000118414 156 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm26086-201ENSMUST00000157902 263 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Gm19840-201ENSMUST00000169624 882 ntBASIC8.2□□□□□ -1.1
Shank3Q4ACU6 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms