Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm19480-201ENSMUST00000185547 667 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm3841-201ENSMUST00000191399 451 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm7463-201ENSMUST00000201541 547 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm43906-201ENSMUST00000203194 906 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
Upf3bQ3ULL6 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upf3bQ3ULL6 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm13983-201ENSMUST00000118018 865 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm12778-201ENSMUST00000122341 333 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm7289-201ENSMUST00000168993 734 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm28117-201ENSMUST00000188472 371 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm18849-201ENSMUST00000189861 560 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm37493-201ENSMUST00000193167 433 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Gm6419-201ENSMUST00000097166 429 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Upf3bQ3ULL6 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm4992-201ENSMUST00000120256 768 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm24781-201ENSMUST00000157636 117 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm5456-201ENSMUST00000170706 844 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm17045-201ENSMUST00000178600 844 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm21839-201ENSMUST00000179536 378 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm17895-201ENSMUST00000194028 874 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm44227-201ENSMUST00000203576 241 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Gm19764-201ENSMUST00000203630 649 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upf3bQ3ULL6 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms