Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1bP97952 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1bP97952 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.13□□□□□ -1.43
Scn1bP97952 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scn1bP97952 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm8534-201ENSMUST00000118553 766 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Gm11928-201ENSMUST00000119323 437 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Gm14053-201ENSMUST00000121662 470 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm27006-201ENSMUST00000182218 943 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Gm37225-201ENSMUST00000193423 325 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Scn1bP97952 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.12□□□□□ -1.43
Scn1bP97952 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 AV026068-229ENSMUST00000225516 595 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Scn1bP97952 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Scn1bP97952 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Scn1bP97952 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.12□□□□□ -1.43
Scn1bP97952 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scn1bP97952 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Snora21-201ENSMUST00000082967 137 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Gm24613-201ENSMUST00000083266 130 ntBASIC6.12□□□□□ -1.43
Scn1bP97952 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1bP97952 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn1bP97952 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Scn1bP97952 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Scn1bP97952 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Scn1bP97952 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1bP97952 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Scn1bP97952 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
Scn1bP97952 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.11□□□□□ -1.43
Scn1bP97952 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scn1bP97952 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1bP97952 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.11□□□□□ -1.43
Scn1bP97952 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1bP97952 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1bP97952 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms