Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.65□□□□□ -1.18
Sox1P53783 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm7733-201ENSMUST00000199038 919 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm42814-201ENSMUST00000199370 460 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm42976-201ENSMUST00000200313 222 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.65□□□□□ -1.18
Sox1P53783 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.65□□□□□ -1.18
Sox1P53783 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.65□□□□□ -1.18
Sox1P53783 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.65□□□□□ -1.18
Sox1P53783 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.65□□□□□ -1.18
Sox1P53783 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Sox1P53783 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox1P53783 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Sox1P53783 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox1P53783 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox1P53783 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Sox1P53783 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox1P53783 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
Sox1P53783 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm24069-201ENSMUST00000104512 127 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm12598-201ENSMUST00000117333 830 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm7700-201ENSMUST00000120273 970 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm11797-201ENSMUST00000121336 754 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm16458-201ENSMUST00000121428 502 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox1P53783 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm24065-201ENSMUST00000157487 264 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm22186-201ENSMUST00000157822 122 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm24498-201ENSMUST00000158445 102 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Ear-ps10-201ENSMUST00000161871 460 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm22698-201ENSMUST00000175375 108 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm22111-201ENSMUST00000178010 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm23687-201ENSMUST00000178664 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm24566-201ENSMUST00000179286 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm23305-201ENSMUST00000179342 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm28637-201ENSMUST00000179424 345 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm26389-201ENSMUST00000179819 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm22130-201ENSMUST00000179979 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm22393-201ENSMUST00000180153 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm25085-201ENSMUST00000180298 79 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Gm21489-201ENSMUST00000189668 818 ntBASIC7.64□□□□□ -1.19
Sox1P53783 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.64□□□□□ -1.19
Sox1P53783 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox1P53783 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.64□□□□□ -1.19
Sox1P53783 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.64□□□□□ -1.19
Sox1P53783 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox1P53783 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox1P53783 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox1P53783 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox1P53783 Gm36401-201ENSMUST00000194255 2028 ntBASIC7.64□□□□□ -1.19
Sox1P53783 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms