Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Shmt1P50431 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Shmt1P50431 AC151904.4-201ENSMUST00000219868 1319 ntBASIC7.27□□□□□ -1.24
Shmt1P50431 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Shmt1P50431 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.27□□□□□ -1.24
Shmt1P50431 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.27□□□□□ -1.24
Shmt1P50431 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm6987-201ENSMUST00000119319 428 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm5166-201ENSMUST00000121332 573 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm12504-202ENSMUST00000148026 306 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm25722-201ENSMUST00000157498 279 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm23810-201ENSMUST00000175150 74 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm24155-201ENSMUST00000175259 110 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Mir6921-201ENSMUST00000183719 80 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm37689-201ENSMUST00000193139 275 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm20128-201ENSMUST00000196189 417 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.27□□□□□ -1.25
Shmt1P50431 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm44837-201ENSMUST00000206863 717 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm45739-201ENSMUST00000213094 388 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.27□□□□□ -1.25
Shmt1P50431 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Shmt1P50431 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Shmt1P50431 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm10145-201ENSMUST00000077776 462 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm26437-201ENSMUST00000082595 105 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm10705-201ENSMUST00000098980 461 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Shmt1P50431 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Shmt1P50431 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Shmt1P50431 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.27□□□□□ -1.25
Shmt1P50431 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Shmt1P50431 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm25724-201ENSMUST00000104531 117 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Mir5617-201ENSMUST00000176786 57 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Shmt1P50431 Gm35323-201ENSMUST00000191836 499 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.26□□□□□ -1.25
Shmt1P50431 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm36965-201ENSMUST00000193797 394 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.26□□□□□ -1.25
Shmt1P50431 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms