Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx2P43241 Snora35-201ENSMUST00000104579 128 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm12890-201ENSMUST00000120885 373 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm27005-201ENSMUST00000182783 921 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm27210-201ENSMUST00000184263 402 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm37135-201ENSMUST00000192652 534 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm45122-201ENSMUST00000206376 784 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm7499-201ENSMUST00000210423 813 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm24695-201ENSMUST00000083877 83 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.44□□□□□ -1.38
Cdx2P43241 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx2P43241 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx2P43241 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdx2P43241 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.44□□□□□ -1.38
Cdx2P43241 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm24048-201ENSMUST00000102411 106 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm25346-201ENSMUST00000104509 128 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm4853-201ENSMUST00000119359 394 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm14746-201ENSMUST00000120309 741 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm26346-201ENSMUST00000157525 329 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
Cdx2P43241 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm27507-201ENSMUST00000184199 93 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx2P43241 Gm45448-201ENSMUST00000211739 209 ntBASIC6.43□□□□□ -1.38
Cdx2P43241 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms