Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cxcl12P40224 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm22210-201ENSMUST00000158101 144 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm37328-201ENSMUST00000193191 640 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm19035-202ENSMUST00000194575 959 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm42584-201ENSMUST00000201404 220 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm34149-201ENSMUST00000203547 304 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.96□□□□□ -1.3
Cxcl12P40224 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Snora44-201ENSMUST00000082670 129 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.96□□□□□ -1.3
Cxcl12P40224 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cxcl12P40224 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm13451-201ENSMUST00000117649 592 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm23884-201ENSMUST00000122687 294 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm4997-201ENSMUST00000154056 360 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm22529-201ENSMUST00000158817 123 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.95□□□□□ -1.3
Cxcl12P40224 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC6.95□□□□□ -1.3
Cxcl12P40224 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cxcl12P40224 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.95□□□□□ -1.3
Cxcl12P40224 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cxcl12P40224 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cxcl12P40224 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.94□□□□□ -1.3
Cxcl12P40224 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.94□□□□□ -1.3
Cxcl12P40224 Gm15073-201ENSMUST00000117432 634 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms