Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.85□□□□□ -0.99
Col18a1P39061 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Col18a1P39061 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Gm14335-201ENSMUST00000119165 810 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Gm6808-201ENSMUST00000162341 807 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Gm7335-201ENSMUST00000172475 373 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Gm4374-201ENSMUST00000204929 424 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Gm17988-201ENSMUST00000208796 535 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 LOC665443-201ENSMUST00000212284 796 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Col18a1P39061 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Col18a1P39061 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.84□□□□□ -0.99
Col18a1P39061 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Col18a1P39061 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Col18a1P39061 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col18a1P39061 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Col18a1P39061 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -1
Col18a1P39061 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 Gm14870-201ENSMUST00000118414 156 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm14791-201ENSMUST00000119061 1166 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm14294-201ENSMUST00000119749 751 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm13537-201ENSMUST00000120467 267 ntBASIC8.84□□□□□ -1
Col18a1P39061 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 Gm22693-201ENSMUST00000175049 442 ntBASIC8.84□□□□□ -1
Col18a1P39061 Mir3110-201ENSMUST00000175053 80 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm24303-201ENSMUST00000178237 126 ntBASIC8.84□□□□□ -1
Col18a1P39061 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm37196-201ENSMUST00000194762 906 ntBASIC8.84□□□□□ -1
Col18a1P39061 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.84□□□□□ -1
Col18a1P39061 Gm42799-201ENSMUST00000201331 328 ntBASIC8.84□□□□□ -1
Col18a1P39061 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.84□□□□□ -1
Col18a1P39061 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC8.84□□□□□ -1
Col18a1P39061 Gm18405-201ENSMUST00000220743 511 ntBASIC8.84□□□□□ -1
Col18a1P39061 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC8.84□□□□□ -1
Col18a1P39061 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Col18a1P39061 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Col18a1P39061 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.83□□□□□ -1
Col18a1P39061 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col18a1P39061 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col18a1P39061 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Gm15901-201ENSMUST00000117663 941 ntBASIC8.83□□□□□ -1
Col18a1P39061 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Col18a1P39061 Gm8321-201ENSMUST00000181691 980 ntBASIC8.83□□□□□ -1
Col18a1P39061 Mir7006-201ENSMUST00000183624 69 ntBASIC8.83□□□□□ -1
Col18a1P39061 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Gm37493-201ENSMUST00000193167 433 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm44830-201ENSMUST00000207667 584 ntBASIC8.83□□□□□ -1
Col18a1P39061 AC122332.1-201ENSMUST00000214384 285 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC8.83□□□□□ -1
Col18a1P39061 AC154481.1-201ENSMUST00000223532 331 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm7731-201ENSMUST00000091759 470 ntBASIC8.83□□□□□ -1
Col18a1P39061 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.83□□□□□ -1
Col18a1P39061 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Col18a1P39061 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Col18a1P39061 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col18a1P39061 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.83□□□□□ -1
Col18a1P39061 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col18a1P39061 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms