Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC5.35□□□□□ -1.55
Sdc1P18828 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC5.35□□□□□ -1.55
Sdc1P18828 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm18914-201ENSMUST00000214625 616 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 AC133948.2-201ENSMUST00000217850 378 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.35□□□□□ -1.55
Sdc1P18828 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC5.35□□□□□ -1.55
Sdc1P18828 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 AC142114.1-201ENSMUST00000227724 328 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.35□□□□□ -1.55
Sdc1P18828 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Mir412-201ENSMUST00000083636 80 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC5.35□□□□□ -1.55
Sdc1P18828 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sdc1P18828 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm15739-201ENSMUST00000118049 872 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm13207-201ENSMUST00000119862 773 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm13740-201ENSMUST00000120590 310 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm13121-201ENSMUST00000120637 632 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm15220-201ENSMUST00000120730 379 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm23954-201ENSMUST00000157213 353 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm25266-201ENSMUST00000158521 304 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm3242-201ENSMUST00000171273 485 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm9274-201ENSMUST00000182505 984 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm29355-201ENSMUST00000188178 697 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm20788-201ENSMUST00000190538 697 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm7341-201ENSMUST00000192183 926 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm37395-201ENSMUST00000194721 697 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm9354-201ENSMUST00000209075 468 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc1P18828 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC5.34□□□□□ -1.55
Sdc1P18828 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC5.34□□□□□ -1.55
Sdc1P18828 AL645704.1-201ENSMUST00000221642 604 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 CT010472.1-201ENSMUST00000224000 704 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sdc1P18828 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.34□□□□□ -1.55
Sdc1P18828 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sdc1P18828 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc1P18828 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Sdc1P18828 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc1P18828 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.34□□□□□ -1.56
Sdc1P18828 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc1P18828 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc1P18828 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sdc1P18828 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms