Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm25093-201ENSMUST00000103993 132 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm14212-201ENSMUST00000122023 826 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm25395-201ENSMUST00000157343 272 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm21392-201ENSMUST00000182950 972 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm8609-201ENSMUST00000182967 998 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm7867-201ENSMUST00000189856 546 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm37620-201ENSMUST00000192910 501 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm37883-201ENSMUST00000194970 725 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm44411-201ENSMUST00000204172 349 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm26130-201ENSMUST00000083171 138 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Chmp6P0C0A3 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm13732-201ENSMUST00000117753 535 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm25989-201ENSMUST00000158761 133 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm27156-201ENSMUST00000184589 754 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm28443-201ENSMUST00000189081 698 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm29141-201ENSMUST00000190357 882 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm42673-201ENSMUST00000202676 337 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm45279-201ENSMUST00000210315 391 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Mir106b-201ENSMUST00000083580 82 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Chmp6P0C0A3 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.25□□□□□ -1.25
Chmp6P0C0A3 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Chmp6P0C0A3 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms