Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm43339-201ENSMUST00000200032 1606 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm25167-201ENSMUST00000104188 120 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm13414-201ENSMUST00000117516 727 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm14466-201ENSMUST00000119028 451 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 BC002163-201ENSMUST00000121906 319 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm24738-201ENSMUST00000158856 123 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm5181-201ENSMUST00000183140 971 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm5920-201ENSMUST00000187390 853 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm37493-201ENSMUST00000193167 433 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm38305-201ENSMUST00000194825 223 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm24826-202ENSMUST00000197298 216 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm18618-201ENSMUST00000222211 473 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Cacna2d3-208ENSMUST00000225985 918 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 CT009556.3-201ENSMUST00000226173 513 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm10307-201ENSMUST00000189839 1337 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.36□□□□□ -1.55
Hmgb3O54879 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Hmgb3O54879 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmgb3O54879 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm14248-201ENSMUST00000117790 544 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm5387-201ENSMUST00000119776 857 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm11581-201ENSMUST00000122024 763 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm26486-201ENSMUST00000158021 110 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms