Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm13265-201ENSMUST00000118090 421 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm14038-201ENSMUST00000121500 807 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm9529-201ENSMUST00000177598 579 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm8241-201ENSMUST00000189286 816 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm37604-201ENSMUST00000191749 1272 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm18592-201ENSMUST00000221529 276 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 AC105950.1-201ENSMUST00000222637 408 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm22053-201ENSMUST00000083394 200 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm21036-201ENSMUST00000207544 2611 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm44417-201ENSMUST00000203298 3359 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm37762-201ENSMUST00000194515 3561 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 AC153152.1-201ENSMUST00000221105 2742 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm23739-201ENSMUST00000102295 108 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm8692-201ENSMUST00000118102 438 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm13455-201ENSMUST00000118767 517 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm12307-201ENSMUST00000120581 590 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm27854-201ENSMUST00000175578 244 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Mir3473e-201ENSMUST00000183932 110 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm29234-201ENSMUST00000187452 1262 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm7266-201ENSMUST00000187999 405 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 AC122327.2-201ENSMUST00000220883 120 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 AC122327.3-201ENSMUST00000221852 120 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 AC166341.1-201ENSMUST00000223360 105 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 Gm7337-202ENSMUST00000181439 2655 ntBASIC12.18□□□□□ -0.46
Ccdc180J3QNE4 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm38009-201ENSMUST00000194884 3341 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm18199-201ENSMUST00000173820 835 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm18191-201ENSMUST00000174624 824 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm44361-201ENSMUST00000197960 94 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm45127-201ENSMUST00000205984 1015 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm30698-201ENSMUST00000214789 3198 ntBASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc180J3QNE4 Gm11245-201ENSMUST00000119419 1037 ntBASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm15959-201ENSMUST00000121724 368 ntBASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Gm20121-201ENSMUST00000198547 1594 ntBASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 AC154481.1-201ENSMUST00000223532 331 ntBASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Olfr519-201ENSMUST00000084752 960 ntBASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc180J3QNE4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms