Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm38840-201ENSMUST00000204716 843 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm6909-201ENSMUST00000209825 989 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm18378-201ENSMUST00000216245 628 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 AC165349.2-201ENSMUST00000219097 426 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm10805-201ENSMUST00000099710 399 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm25313-201ENSMUST00000101817 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Snord65-201ENSMUST00000104269 72 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm26469-201ENSMUST00000116765 121 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm13137-201ENSMUST00000118035 345 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm11969-201ENSMUST00000118848 356 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm15836-201ENSMUST00000119952 793 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm15224-201ENSMUST00000120501 388 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm12140-201ENSMUST00000121214 544 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm17655-201ENSMUST00000167969 255 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm8974-201ENSMUST00000175770 479 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm25082-201ENSMUST00000177296 255 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm23287-201ENSMUST00000179427 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm23143-201ENSMUST00000180137 116 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm27218-201ENSMUST00000183745 392 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Mir6930-201ENSMUST00000183859 68 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm29576-201ENSMUST00000188020 678 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm28803-201ENSMUST00000190385 764 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm28354-201ENSMUST00000190904 678 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm37339-201ENSMUST00000194142 392 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm38360-201ENSMUST00000195130 454 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm42932-201ENSMUST00000197280 744 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm40319-201ENSMUST00000199785 481 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm44285-201ENSMUST00000203557 940 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm5154-201ENSMUST00000203971 399 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm9354-201ENSMUST00000209075 468 ntBASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.55□□□□□ -1.36
Pcdh1F7BJK1 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 325.3 ms