Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mir8105-201ENSMUST00000184718 89 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm28801-201ENSMUST00000188761 449 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm5244-202ENSMUST00000189517 743 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm42673-201ENSMUST00000202676 337 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm19764-201ENSMUST00000203630 649 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm7746-201ENSMUST00000120966 503 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm23891-201ENSMUST00000158114 138 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm20549-201ENSMUST00000174804 429 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm24756-201ENSMUST00000177002 96 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm28958-201ENSMUST00000185864 703 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm43203-201ENSMUST00000200130 558 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm4585-201ENSMUST00000207218 452 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm2975-201ENSMUST00000209710 820 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm17950-201ENSMUST00000214617 646 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm31711-201ENSMUST00000220687 196 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm23054-201ENSMUST00000082804 162 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim3Q9R1R2 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim3Q9R1R2 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms