Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 CT009550.2-201ENSMUST00000228851 399 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 AC122357.1-201ENSMUST00000221652 1515 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 CT009734.1-201ENSMUST00000227657 1687 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm8624-201ENSMUST00000118083 432 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm14979-201ENSMUST00000121561 1035 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm7502-201ENSMUST00000169235 733 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm3121-201ENSMUST00000187086 406 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm37550-201ENSMUST00000193230 463 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm29950-201ENSMUST00000195273 237 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm20074-201ENSMUST00000208144 484 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 AC107663.3-201ENSMUST00000225873 601 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ube3bQ9ES34 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm23701-201ENSMUST00000103893 110 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm13728-201ENSMUST00000117471 400 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm16056-201ENSMUST00000119293 135 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm5943-201ENSMUST00000119458 459 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm11689-201ENSMUST00000120766 302 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm9697-201ENSMUST00000147052 997 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms