Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm44984-201ENSMUST00000207802 394 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm19056-201ENSMUST00000218220 797 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm8275-201ENSMUST00000219732 424 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm25189-201ENSMUST00000083911 164 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Lima1Q9ERG0 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm25379-201ENSMUST00000104338 114 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm8577-201ENSMUST00000122420 986 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm25969-201ENSMUST00000157166 132 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm26486-201ENSMUST00000158021 110 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm22569-201ENSMUST00000175545 124 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm9167-201ENSMUST00000182469 962 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Mir6972-201ENSMUST00000184774 64 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm42804-201ENSMUST00000199701 178 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm45042-201ENSMUST00000207377 211 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Gm5341-201ENSMUST00000058881 489 ntBASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lima1Q9ERG0 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm14466-201ENSMUST00000119028 451 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm15081-201ENSMUST00000119794 844 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm22025-201ENSMUST00000122734 302 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm16357-201ENSMUST00000144091 474 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm7418-201ENSMUST00000162120 801 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm7651-201ENSMUST00000173398 901 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm3585-201ENSMUST00000173438 875 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm24756-201ENSMUST00000177002 96 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm27507-201ENSMUST00000184199 93 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Mir6241-201ENSMUST00000184225 103 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms