Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Kcnab2-205ENSMUST00000159840 3574 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4Q99P72 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gm5402-201ENSMUST00000119588 1618 ntBASIC11.16□□□□□ -0.62
Rtn4Q99P72 Zfp354b-203ENSMUST00000164280 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4Q99P72 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gm36952-201ENSMUST00000194923 3625 ntBASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gm5975-201ENSMUST00000185256 1399 ntBASIC11.16□□□□□ -0.62
Rtn4Q99P72 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Rtn4Q99P72 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 D430036J16Rik-202ENSMUST00000181447 1732 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm45562-201ENSMUST00000210015 1537 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 6430550D23Rik-202ENSMUST00000109617 1872 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm18876-201ENSMUST00000219985 1849 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm25613-201ENSMUST00000104012 129 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm15399-201ENSMUST00000118055 724 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm14172-201ENSMUST00000118255 644 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm12515-201ENSMUST00000120116 361 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 4930519G04Rik-203ENSMUST00000134389 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm24847-201ENSMUST00000158032 108 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Ear-ps9-201ENSMUST00000161963 460 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm6673-201ENSMUST00000166114 700 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm7991-201ENSMUST00000168668 591 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm23619-201ENSMUST00000178411 94 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm25474-201ENSMUST00000179052 94 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm22047-201ENSMUST00000179176 94 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm28404-201ENSMUST00000190242 453 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm7761-201ENSMUST00000190510 921 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Iglc4-201ENSMUST00000197046 314 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm43406-201ENSMUST00000200356 334 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Apoh-201ENSMUST00000000049 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Ear14-201ENSMUST00000049559 468 ntBASIC11.15□□□□□ -0.62
Rtn4Q99P72 Olfr1382-201ENSMUST00000074543 936 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Olfr1371-201ENSMUST00000075844 936 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Zscan18-205ENSMUST00000211392 3709 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm15342-201ENSMUST00000146222 2100 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4Q99P72 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4Q99P72 Gm43292-201ENSMUST00000199580 2449 ntBASIC11.15□□□□□ -0.63
Rtn4Q99P72 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4Q99P72 Gm38278-201ENSMUST00000194715 1365 ntBASIC11.15□□□□□ -0.63
Rtn4Q99P72 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC11.15□□□□□ -0.63
Rtn4Q99P72 AC147250.1-201ENSMUST00000224781 1364 ntBASIC11.15□□□□□ -0.63
Rtn4Q99P72 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4Q99P72 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4Q99P72 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4Q99P72 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 AC154806.2-201ENSMUST00000227212 2385 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gm21043-201ENSMUST00000199316 1517 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gm37074-201ENSMUST00000193444 1843 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gm45718-201ENSMUST00000207577 3794 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Afp-201ENSMUST00000042755 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Gm25785-201ENSMUST00000104129 125 ntBASIC11.14□□□□□ -0.63
Rtn4Q99P72 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4Q99P72 Snord88c-201ENSMUST00000116853 90 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms