Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm26417-201ENSMUST00000104274 135 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm11865-201ENSMUST00000118093 859 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm14729-201ENSMUST00000118373 689 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm15081-201ENSMUST00000119794 844 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm14038-201ENSMUST00000121500 807 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm15187-201ENSMUST00000122329 264 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm22523-201ENSMUST00000158696 100 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm17047-201ENSMUST00000167709 430 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm20691-201ENSMUST00000176889 333 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm20615-201ENSMUST00000177503 705 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm29369-201ENSMUST00000190674 615 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm18484-201ENSMUST00000204389 991 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm18628-201ENSMUST00000220584 475 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm21731-201ENSMUST00000079524 489 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm7493-201ENSMUST00000085919 626 ntBASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nup35Q8R4R6 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.34□□□□□ -1.56
Nup35Q8R4R6 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.34□□□□□ -1.56
Nup35Q8R4R6 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm25631-201ENSMUST00000104390 130 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm14865-201ENSMUST00000117523 494 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm15928-201ENSMUST00000122455 280 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm22094-201ENSMUST00000158976 117 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm27684-201ENSMUST00000183778 80 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm27152-201ENSMUST00000183828 99 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Txn-ps1-201ENSMUST00000186385 309 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm38373-201ENSMUST00000192042 288 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm42965-201ENSMUST00000201254 250 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm45070-201ENSMUST00000208100 246 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm4548-201ENSMUST00000208487 509 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm9293-201ENSMUST00000223096 306 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 AC159205.1-201ENSMUST00000225513 1099 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Gm9788-201ENSMUST00000057038 906 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup35Q8R4R6 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms