Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm26016-201ENSMUST00000104403 129 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm15361-201ENSMUST00000119320 444 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm23740-201ENSMUST00000157385 100 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm7420-201ENSMUST00000162836 842 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm17061-201ENSMUST00000163167 499 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm24369-201ENSMUST00000175387 96 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm18415-201ENSMUST00000177464 647 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm21182-201ENSMUST00000178899 794 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm4308-201ENSMUST00000179735 914 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 V1rg10-201ENSMUST00000183378 937 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm27817-201ENSMUST00000184302 233 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Mir6972-201ENSMUST00000184774 64 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm37349-201ENSMUST00000194205 624 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm43926-201ENSMUST00000203978 430 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm44722-201ENSMUST00000206473 436 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm18860-201ENSMUST00000212029 764 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm18039-201ENSMUST00000217816 728 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm22575-201ENSMUST00000082981 110 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm22865-201ENSMUST00000083949 214 ntBASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.66□□□□□ -1.34
Clrn1Q8K445 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms