Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm23276-201ENSMUST00000157913 138 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm24057-201ENSMUST00000158616 302 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm24682-201ENSMUST00000158764 137 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm45739-201ENSMUST00000213094 388 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm19186-201ENSMUST00000219922 333 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm37703-201ENSMUST00000192292 1784 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm15203-201ENSMUST00000117668 455 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm14869-201ENSMUST00000119007 884 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm14466-201ENSMUST00000119028 451 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm11796-201ENSMUST00000120208 972 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm5809-201ENSMUST00000121854 529 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm22728-201ENSMUST00000158087 129 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm23116-201ENSMUST00000158481 67 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm25617-201ENSMUST00000179548 133 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm26528-201ENSMUST00000181965 283 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm28952-201ENSMUST00000189285 681 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm43546-201ENSMUST00000196721 943 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm43044-201ENSMUST00000198091 379 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm25617-202ENSMUST00000198387 132 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm2860-201ENSMUST00000199226 707 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm42713-201ENSMUST00000202709 945 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm45136-201ENSMUST00000205793 943 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm10126-201ENSMUST00000221732 168 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.03□□□□□ -1.28
CopaQ8CIE6 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CopaQ8CIE6 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.02□□□□□ -1.28
CopaQ8CIE6 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
CopaQ8CIE6 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.02□□□□□ -1.28
CopaQ8CIE6 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CopaQ8CIE6 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
CopaQ8CIE6 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
CopaQ8CIE6 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CopaQ8CIE6 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms