Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm25614-201ENSMUST00000104013 133 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm22152-201ENSMUST00000116966 125 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5387-201ENSMUST00000119776 857 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12297-201ENSMUST00000121380 979 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm26480-201ENSMUST00000122619 297 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15843-201ENSMUST00000146593 529 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm6726-201ENSMUST00000172786 681 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Mir8120-201ENSMUST00000185035 139 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28801-201ENSMUST00000188761 449 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm38291-201ENSMUST00000193671 259 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm6236-201ENSMUST00000193785 1009 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm17950-201ENSMUST00000214617 646 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28bQ8CEG5 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.59□□□□□ -1.36
Ccdc28bQ8CEG5 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm15129-201ENSMUST00000119673 279 ntBASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm22235-201ENSMUST00000157085 110 ntBASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm24883-201ENSMUST00000158391 281 ntBASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm25717-201ENSMUST00000158631 353 ntBASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28bQ8CEG5 Gm6070-201ENSMUST00000207275 419 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms