Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Phxr4-202ENSMUST00000216590 1391 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm13455-201ENSMUST00000118767 517 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm14631-201ENSMUST00000119067 594 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm13604-201ENSMUST00000119332 482 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm7613-201ENSMUST00000139070 487 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm23071-201ENSMUST00000158242 115 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm23259-201ENSMUST00000158318 303 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm9556-201ENSMUST00000182938 940 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Atg4aQ8C9S8 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Atg4aQ8C9S8 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Mir678-201ENSMUST00000102114 84 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Rnu11-201ENSMUST00000104135 134 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm15186-201ENSMUST00000119345 563 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm4992-201ENSMUST00000120256 768 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm14900-201ENSMUST00000120304 733 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm7452-201ENSMUST00000200764 788 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm45514-201ENSMUST00000211531 689 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm43864-201ENSMUST00000204452 4028 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.02□□□□□ -1.13
Atg4aQ8C9S8 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm44039-201ENSMUST00000204192 2246 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm25057-201ENSMUST00000157366 88 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms