Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.85□□□□□ -1.31
Trub1Q8C0D0 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trub1Q8C0D0 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm4997-201ENSMUST00000154056 360 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm26321-201ENSMUST00000157740 242 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trub1Q8C0D0 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.84□□□□□ -1.32
Trub1Q8C0D0 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Trub1Q8C0D0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Mir678-201ENSMUST00000102114 84 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm14513-201ENSMUST00000117403 123 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm13207-201ENSMUST00000119862 773 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm15007-201ENSMUST00000119982 710 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm5166-201ENSMUST00000121332 573 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm9274-201ENSMUST00000182505 984 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm28620-201ENSMUST00000190463 439 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm18838-201ENSMUST00000204855 886 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms