Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm4853-201ENSMUST00000119359 394 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm7113-201ENSMUST00000120477 958 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm15502-201ENSMUST00000121449 208 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm20615-201ENSMUST00000177503 705 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm17048-201ENSMUST00000179266 847 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm29013-201ENSMUST00000187431 237 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm43383-201ENSMUST00000195981 469 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm20223-201ENSMUST00000199932 805 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm7492-201ENSMUST00000201745 725 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm5324-201ENSMUST00000208115 476 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm35619-201ENSMUST00000222548 600 ntBASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ddx55Q6ZPL9 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Ddx55Q6ZPL9 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.84□□□□□ -1.16
Ddx55Q6ZPL9 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
Ddx55Q6ZPL9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.84□□□□□ -1.16
Ddx55Q6ZPL9 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Ddx55Q6ZPL9 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm26410-201ENSMUST00000157670 261 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm17044-201ENSMUST00000168549 828 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm22701-201ENSMUST00000175371 291 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm26570-201ENSMUST00000180672 342 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm28413-201ENSMUST00000189369 291 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Gm17950-201ENSMUST00000214617 646 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Zmym2-202ENSMUST00000223669 1281 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.83□□□□□ -1.16
Ddx55Q6ZPL9 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms