Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Scaf4Q6PFF0 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.07□□□□□ -1.28
Scaf4Q6PFF0 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.07□□□□□ -1.28
Scaf4Q6PFF0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scaf4Q6PFF0 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Scaf4Q6PFF0 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm14032-201ENSMUST00000117686 1026 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm8812-201ENSMUST00000118496 412 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm14787-201ENSMUST00000121236 388 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm12499-201ENSMUST00000121961 546 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm2709-201ENSMUST00000142979 350 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm16026-202ENSMUST00000159695 772 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm16184-201ENSMUST00000162324 573 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm21045-201ENSMUST00000183058 1020 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm28413-201ENSMUST00000189369 291 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm28164-201ENSMUST00000190143 442 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm37187-201ENSMUST00000193425 341 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm8925-201ENSMUST00000197212 763 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm44451-201ENSMUST00000203767 483 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm6064-201ENSMUST00000203999 454 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm45382-201ENSMUST00000210607 151 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm45912-201ENSMUST00000210646 543 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm45497-201ENSMUST00000211701 740 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Diaph3-206ENSMUST00000226745 713 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm2840-201ENSMUST00000048361 411 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm25926-201ENSMUST00000082899 160 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm26130-201ENSMUST00000083171 138 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm16421-201ENSMUST00000117616 1557 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Scaf4Q6PFF0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Ighv1-67-201ENSMUST00000103538 294 ntBASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Scaf4Q6PFF0 Gm23323-201ENSMUST00000104471 133 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms