Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm19885-201ENSMUST00000212853 343 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Gm5374-202ENSMUST00000222910 314 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 AC158388.1-201ENSMUST00000225441 256 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Gm26063-201ENSMUST00000083378 107 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC6.55□□□□□ -1.36
ClpbQ60649 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ClpbQ60649 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ClpbQ60649 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
ClpbQ60649 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 AC163296.2-201ENSMUST00000220177 1315 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
ClpbQ60649 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ClpbQ60649 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm24519-201ENSMUST00000104507 132 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm13768-201ENSMUST00000116469 929 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm12375-201ENSMUST00000119331 921 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm26025-201ENSMUST00000158655 271 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm16112-201ENSMUST00000159075 382 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ClpbQ60649 Gm4373-201ENSMUST00000178571 556 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29048-201ENSMUST00000185342 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29403-201ENSMUST00000185491 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28234-201ENSMUST00000185657 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28248-201ENSMUST00000186093 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29633-202ENSMUST00000186217 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28829-201ENSMUST00000186231 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28261-201ENSMUST00000186417 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28815-201ENSMUST00000186751 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28608-201ENSMUST00000186860 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28122-201ENSMUST00000187088 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28420-201ENSMUST00000187340 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28106-201ENSMUST00000187640 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28698-201ENSMUST00000187734 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29224-201ENSMUST00000187965 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29189-201ENSMUST00000188018 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29476-201ENSMUST00000188397 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29505-201ENSMUST00000188424 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28125-201ENSMUST00000188470 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29391-201ENSMUST00000188545 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm9114-201ENSMUST00000188558 997 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29280-201ENSMUST00000188571 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28349-201ENSMUST00000188590 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29652-201ENSMUST00000188622 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28819-206ENSMUST00000188816 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29079-201ENSMUST00000188875 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28213-201ENSMUST00000189183 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29382-201ENSMUST00000189549 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29377-205ENSMUST00000189603 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28327-201ENSMUST00000189638 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28790-201ENSMUST00000189642 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28907-201ENSMUST00000189700 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29586-207ENSMUST00000189745 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29115-201ENSMUST00000189870 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28366-201ENSMUST00000190147 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29212-201ENSMUST00000190384 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29533-201ENSMUST00000190403 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28162-201ENSMUST00000190545 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29030-201ENSMUST00000190848 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28742-201ENSMUST00000191001 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28899-201ENSMUST00000191161 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29567-201ENSMUST00000191188 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28222-201ENSMUST00000191210 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28776-201ENSMUST00000191282 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29306-201ENSMUST00000191366 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29618-201ENSMUST00000191423 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28136-210ENSMUST00000191432 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm29251-201ENSMUST00000191480 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm28658-201ENSMUST00000191532 615 ntBASIC6.54□□□□□ -1.36
ClpbQ60649 Gm32180-201ENSMUST00000192415 615 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms