Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm25574-201ENSMUST00000175245 249 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm8245-201ENSMUST00000182434 987 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm27596-201ENSMUST00000185061 83 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm8539-201ENSMUST00000199822 501 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm44258-201ENSMUST00000204925 301 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm46424-201ENSMUST00000221567 168 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AV026068-218ENSMUST00000223980 575 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim43aQ3TL54 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.09□□□□□ -1.27
Trim43aQ3TL54 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.28
Trim43aQ3TL54 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim43aQ3TL54 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm25498-201ENSMUST00000104424 129 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm12635-201ENSMUST00000117285 752 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm15105-201ENSMUST00000117777 204 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm13486-201ENSMUST00000119910 282 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm15842-201ENSMUST00000120513 618 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm12903-201ENSMUST00000121015 544 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm20549-201ENSMUST00000174804 429 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm9556-201ENSMUST00000182938 940 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm27782-201ENSMUST00000185059 199 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm18501-201ENSMUST00000185363 664 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm28580-201ENSMUST00000186767 88 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm29160-201ENSMUST00000190094 699 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm43436-201ENSMUST00000199308 147 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm45100-201ENSMUST00000209153 391 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm19007-201ENSMUST00000217746 874 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim43aQ3TL54 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms