Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm27373-201ENSMUST00000184017 184 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm28186-201ENSMUST00000187447 679 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm28443-201ENSMUST00000189081 698 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm43774-201ENSMUST00000196327 878 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm44353-201ENSMUST00000200618 138 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm18290-201ENSMUST00000202900 844 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm45198-201ENSMUST00000206796 591 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm6581-201ENSMUST00000214545 260 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC158631.2-201ENSMUST00000219999 478 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm18960-201ENSMUST00000222962 713 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC160962.2-201ENSMUST00000224761 632 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm22053-201ENSMUST00000083394 200 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm15018-201ENSMUST00000117090 633 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm12535-201ENSMUST00000121025 484 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm16026-205ENSMUST00000162923 641 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm17075-201ENSMUST00000171924 670 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm22642-201ENSMUST00000175352 252 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm18547-201ENSMUST00000192439 811 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm38079-201ENSMUST00000195603 154 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm43656-201ENSMUST00000197882 434 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm44213-201ENSMUST00000204977 703 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm18860-201ENSMUST00000212029 764 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm5119-201ENSMUST00000215858 634 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Gm5080-201ENSMUST00000220341 743 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC173482.2-201ENSMUST00000224044 750 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.76□□□□□ -1.33
Usp39Q3TIX9 Glycam1-204ENSMUST00000228895 641 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms