Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm17835-201ENSMUST00000196870 499 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm43212-201ENSMUST00000198208 394 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm18537-201ENSMUST00000205709 989 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm9240-201ENSMUST00000206527 742 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm18907-201ENSMUST00000209719 932 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm9689-201ENSMUST00000210009 428 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm45795-201ENSMUST00000211847 400 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.03□□□□□ -1.28
Msx2Q03358 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 AL772397.1-201ENSMUST00000216707 606 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm5080-201ENSMUST00000220341 743 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm5374-201ENSMUST00000222868 657 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 AC100209.1-201ENSMUST00000225562 409 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 Olfr890-201ENSMUST00000079804 945 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Msx2Q03358 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Msx2Q03358 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Msx2Q03358 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.03□□□□□ -1.28
Msx2Q03358 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Msx2Q03358 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Msx2Q03358 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Msx2Q03358 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
Msx2Q03358 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.28
Msx2Q03358 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.28
Msx2Q03358 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Msx2Q03358 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm18493-201ENSMUST00000192084 1612 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Msx2Q03358 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm25232-201ENSMUST00000104502 132 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Msx2Q03358 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm13458-201ENSMUST00000118239 367 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm16458-201ENSMUST00000121428 502 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm13282-201ENSMUST00000121577 545 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 n-R5s76-201ENSMUST00000122700 113 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm24530-201ENSMUST00000157948 288 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm23897-201ENSMUST00000158110 158 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm3611-201ENSMUST00000173687 877 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm22408-201ENSMUST00000174925 65 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm27018-201ENSMUST00000181136 225 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.02□□□□□ -1.29
Msx2Q03358 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.02□□□□□ -1.29
Msx2Q03358 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.02□□□□□ -1.29
Msx2Q03358 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.02□□□□□ -1.29
Msx2Q03358 Gm42932-201ENSMUST00000197280 744 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms