Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm14300-201ENSMUST00000120800 946 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Mir5125-201ENSMUST00000175240 79 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Mir6975-201ENSMUST00000184879 61 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm43524-201ENSMUST00000197278 298 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm29745-201ENSMUST00000198005 687 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm43222-201ENSMUST00000199013 603 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PrkdcP97313 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm44652-201ENSMUST00000208648 2854 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm37199-201ENSMUST00000193881 4065 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm43292-201ENSMUST00000199580 2449 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm43176-201ENSMUST00000199653 2989 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PrkdcP97313 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm42522-201ENSMUST00000196071 255 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm6290-201ENSMUST00000207666 1158 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 AC108846.4-201ENSMUST00000216783 341 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.41□□□□□ -1.7
PrkdcP97313 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
PrkdcP97313 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm20236-201ENSMUST00000193037 4540 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm37094-201ENSMUST00000193352 4540 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PrkdcP97313 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm5841-201ENSMUST00000195307 2177 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm11737-201ENSMUST00000118713 468 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm15331-201ENSMUST00000120225 385 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm25489-201ENSMUST00000158727 141 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.4□□□□□ -1.7
PrkdcP97313 Mir6943-201ENSMUST00000185186 66 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm30694-201ENSMUST00000209278 1230 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm9315-201ENSMUST00000222696 908 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 AC163660.1-201ENSMUST00000223696 818 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 AC154250.1-201ENSMUST00000224775 489 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC4.4□□□□□ -1.7
PrkdcP97313 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm6101-201ENSMUST00000195384 1867 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PrkdcP97313 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 AC161884.1-201ENSMUST00000225436 2174 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms