Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CiitaP79621 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CiitaP79621 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CiitaP79621 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CiitaP79621 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CiitaP79621 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.35□□□□□ -1.23
CiitaP79621 Gm25785-201ENSMUST00000104129 125 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.35□□□□□ -1.23
CiitaP79621 Gm15149-201ENSMUST00000119370 360 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm11796-201ENSMUST00000120208 972 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm13357-201ENSMUST00000120528 537 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm8089-201ENSMUST00000122463 968 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.35□□□□□ -1.23
CiitaP79621 Gm28620-201ENSMUST00000190463 439 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.35□□□□□ -1.23
CiitaP79621 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CiitaP79621 Gm7351-201ENSMUST00000210745 580 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.35□□□□□ -1.23
CiitaP79621 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.35□□□□□ -1.23
CiitaP79621 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.35□□□□□ -1.23
CiitaP79621 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CiitaP79621 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm22053-201ENSMUST00000083394 200 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CiitaP79621 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CiitaP79621 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CiitaP79621 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.35□□□□□ -1.23
CiitaP79621 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.35□□□□□ -1.23
CiitaP79621 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CiitaP79621 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.34□□□□□ -1.23
CiitaP79621 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Gm23979-201ENSMUST00000104071 128 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.34□□□□□ -1.23
CiitaP79621 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Gm3585-201ENSMUST00000173438 875 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm28023-201ENSMUST00000184556 60 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm27825-201ENSMUST00000184586 60 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm27299-201ENSMUST00000184593 103 ntBASIC7.34□□□□□ -1.23
CiitaP79621 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Gm3841-201ENSMUST00000191399 451 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm2229-201ENSMUST00000193328 710 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm7804-202ENSMUST00000194187 854 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm9240-201ENSMUST00000206527 742 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.34□□□□□ -1.23
CiitaP79621 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.34□□□□□ -1.23
CiitaP79621 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CiitaP79621 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CiitaP79621 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms