Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.67□□□□□ -1.5
Ufd1P70362 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ufd1P70362 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ufd1P70362 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ufd1P70362 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ufd1P70362 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm17184-201ENSMUST00000111864 462 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm15739-201ENSMUST00000118049 872 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm14727-201ENSMUST00000118526 525 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm11689-201ENSMUST00000120766 302 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm14721-201ENSMUST00000121381 525 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm11761-201ENSMUST00000121392 445 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm14990-201ENSMUST00000122354 445 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm25722-201ENSMUST00000157498 279 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm26211-201ENSMUST00000158578 129 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm26738-201ENSMUST00000181312 601 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Mir6357-201ENSMUST00000184246 104 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm28239-201ENSMUST00000190225 447 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm28070-201ENSMUST00000191502 445 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Mir1897-202ENSMUST00000198006 79 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm44971-201ENSMUST00000206192 337 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 AC133948.2-201ENSMUST00000217850 378 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC5.66□□□□□ -1.5
Ufd1P70362 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.66□□□□□ -1.5
Ufd1P70362 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ufd1P70362 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Ufd1P70362 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ufd1P70362 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ufd1P70362 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ufd1P70362 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Ufd1P70362 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm25760-201ENSMUST00000103989 132 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm11951-201ENSMUST00000116005 431 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm11880-201ENSMUST00000117612 399 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm12601-201ENSMUST00000118994 846 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm12944-201ENSMUST00000119262 463 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm3208-201ENSMUST00000168281 427 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm8304-201ENSMUST00000185744 584 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm18033-201ENSMUST00000186678 550 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm7341-201ENSMUST00000192183 926 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm8101-201ENSMUST00000192796 478 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm37493-201ENSMUST00000193167 433 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm2505-201ENSMUST00000200413 825 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm44565-201ENSMUST00000208194 269 ntBASIC5.65□□□□□ -1.5
Ufd1P70362 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ufd1P70362 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms