Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm29755-201ENSMUST00000196976 948 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm2505-201ENSMUST00000200413 825 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm34424-201ENSMUST00000213400 782 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Gm24046-201ENSMUST00000083111 165 ntBASIC7.85□□□□□ -1.15
Hmgb1P63158 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Hmgb1P63158 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb1P63158 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmgb1P63158 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Hmgb1P63158 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm24373-201ENSMUST00000104393 132 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm25725-201ENSMUST00000104528 130 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm13878-201ENSMUST00000117986 577 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm8812-201ENSMUST00000118496 412 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm13755-201ENSMUST00000118509 305 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm14836-201ENSMUST00000118567 471 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm9435-201ENSMUST00000120379 877 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm23657-201ENSMUST00000122623 294 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.84□□□□□ -1.15
Hmgb1P63158 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm3091-201ENSMUST00000163408 484 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm3208-201ENSMUST00000168281 427 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm7991-201ENSMUST00000168668 591 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm6536-201ENSMUST00000171180 615 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm21430-201ENSMUST00000182998 998 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Mir6930-201ENSMUST00000183859 68 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Mir6398-201ENSMUST00000184541 102 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.84□□□□□ -1.15
Hmgb1P63158 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.84□□□□□ -1.15
Hmgb1P63158 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm7341-201ENSMUST00000192183 926 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm42734-201ENSMUST00000201656 878 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm6581-201ENSMUST00000214545 260 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm18586-201ENSMUST00000217265 518 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb1P63158 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Gm16020-201ENSMUST00000084281 210 ntBASIC7.84□□□□□ -1.15
Hmgb1P63158 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb1P63158 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb1P63158 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb1P63158 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Hmgb1P63158 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
Hmgb1P63158 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Hmgb1P63158 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.83□□□□□ -1.16
Hmgb1P63158 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb1P63158 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.83□□□□□ -1.16
Hmgb1P63158 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb1P63158 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.83□□□□□ -1.16
Hmgb1P63158 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb1P63158 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms