Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Tpm1P58771 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Tpm1P58771 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Tpm1P58771 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Tpm1P58771 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Tpm1P58771 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.35□□□□□ -1.23
Tpm1P58771 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Tpm1P58771 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.35□□□□□ -1.23
Tpm1P58771 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.35□□□□□ -1.23
Tpm1P58771 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Tpm1P58771 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Tpm1P58771 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Tpm1P58771 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Tpm1P58771 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Tpm1P58771 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm22707-201ENSMUST00000103834 110 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gm27001-201ENSMUST00000182252 936 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm8182-201ENSMUST00000197863 769 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm42965-201ENSMUST00000201254 250 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm45122-201ENSMUST00000206376 784 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gm7419-201ENSMUST00000209962 925 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm19116-201ENSMUST00000218592 642 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Tpm1P58771 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Tpm1P58771 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.34□□□□□ -1.23
Tpm1P58771 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
Tpm1P58771 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Tpm1P58771 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Tpm1P58771 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Tpm1P58771 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Tpm1P58771 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Tpm1P58771 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Tpm1P58771 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm22774-201ENSMUST00000102084 109 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Tpm1P58771 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm12219-201ENSMUST00000119198 443 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Gm25969-201ENSMUST00000157166 132 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.33□□□□□ -1.24
Tpm1P58771 Mir6922-201ENSMUST00000185099 66 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm18914-201ENSMUST00000214625 616 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 AC160635.1-201ENSMUST00000216731 474 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm24451-201ENSMUST00000083353 133 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Tpm1P58771 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Tpm1P58771 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Tpm1P58771 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Tpm1P58771 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Tpm1P58771 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.32□□□□□ -1.24
Tpm1P58771 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Tpm1P58771 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Tpm1P58771 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms